Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.38■□□□□ 0.21
ERCC3P19447 AC141586.1-203ENST00000567242 366 ntBASIC16.38■□□□□ 0.21
ERCC3P19447 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.38■□□□□ 0.21
ERCC3P19447 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC3P19447 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 AC098934.1-203ENST00000442868 1262 ntBASIC16.37■□□□□ 0.21
ERCC3P19447 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.37■□□□□ 0.21
ERCC3P19447 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.37■□□□□ 0.21
ERCC3P19447 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.37■□□□□ 0.21
ERCC3P19447 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 NDUFB10P1-201ENST00000567319 521 ntBASIC16.37■□□□□ 0.21
ERCC3P19447 AL021707.6-201ENST00000609212 491 ntBASIC16.37■□□□□ 0.21
ERCC3P19447 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.37■□□□□ 0.21
ERCC3P19447 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ERCC3P19447 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.37■□□□□ 0.21
ERCC3P19447 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC3P19447 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 AL928921.2-201ENST00000641325 2442 ntBASIC16.36■□□□□ 0.21
ERCC3P19447 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC3P19447 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
ERCC3P19447 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ERCC3P19447 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 SCARNA12-201ENST00000459155 270 ntBASIC16.36■□□□□ 0.21
ERCC3P19447 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.36■□□□□ 0.21
ERCC3P19447 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC3P19447 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.36■□□□□ 0.21
ERCC3P19447 C2orf69P1-201ENST00000563532 1093 ntBASIC16.36■□□□□ 0.21
ERCC3P19447 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC3P19447 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC3P19447 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC3P19447 AC006158.1-201ENST00000610661 249 ntBASIC16.36■□□□□ 0.21
ERCC3P19447 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ERCC3P19447 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.36■□□□□ 0.21
ERCC3P19447 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ERCC3P19447 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ERCC3P19447 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC3P19447 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC3P19447 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.35■□□□□ 0.21
ERCC3P19447 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ERCC3P19447 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ERCC3P19447 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ERCC3P19447 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ERCC3P19447 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.35■□□□□ 0.21
ERCC3P19447 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms