Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.23□□□□□ -0.13
RETP07949 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
RETP07949 AL109809.1-201ENST00000418979 1367 ntBASIC14.23□□□□□ -0.13
RETP07949 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RETP07949 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RETP07949 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.23□□□□□ -0.13
RETP07949 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
RETP07949 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.23□□□□□ -0.13
RETP07949 RPL3P5-201ENST00000441645 1232 ntBASIC14.23□□□□□ -0.13
RETP07949 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.23□□□□□ -0.13
RETP07949 ALG1L3P-201ENST00000503331 765 ntBASIC14.23□□□□□ -0.13
RETP07949 IGHEP1-201ENST00000521393 651 ntBASIC14.23□□□□□ -0.13
RETP07949 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.23□□□□□ -0.13
RETP07949 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.23□□□□□ -0.13
RETP07949 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RETP07949 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.23□□□□□ -0.13
RETP07949 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.23□□□□□ -0.13
RETP07949 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RETP07949 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.23□□□□□ -0.13
RETP07949 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RETP07949 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RETP07949 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RETP07949 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RETP07949 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 AL137784.3-201ENST00000623858 2288 ntBASIC14.22□□□□□ -0.13
RETP07949 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 AP002353.1-201ENST00000528257 1599 ntBASIC14.22□□□□□ -0.13
RETP07949 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.22□□□□□ -0.13
RETP07949 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.22□□□□□ -0.13
RETP07949 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.22□□□□□ -0.13
RETP07949 SBF1P1-201ENST00000444527 5631 ntBASIC14.22□□□□□ -0.13
RETP07949 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RETP07949 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.22□□□□□ -0.13
RETP07949 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.22□□□□□ -0.13
RETP07949 BPIFB5P-201ENST00000457066 1099 ntBASIC14.22□□□□□ -0.13
RETP07949 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.22□□□□□ -0.13
RETP07949 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.22□□□□□ -0.13
RETP07949 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.22□□□□□ -0.13
RETP07949 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.22□□□□□ -0.13
RETP07949 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.22□□□□□ -0.13
RETP07949 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.22□□□□□ -0.13
RETP07949 AC008972.2-201ENST00000606587 494 ntBASIC14.22□□□□□ -0.13
RETP07949 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.22□□□□□ -0.13
RETP07949 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.22□□□□□ -0.13
RETP07949 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.22□□□□□ -0.13
RETP07949 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RETP07949 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RETP07949 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.22□□□□□ -0.13
RETP07949 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RETP07949 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.22□□□□□ -0.13
RETP07949 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RETP07949 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.22□□□□□ -0.13
RETP07949 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.22□□□□□ -0.13
RETP07949 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RETP07949 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.21□□□□□ -0.13
RETP07949 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
RETP07949 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RETP07949 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RETP07949 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms