Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC17.94■□□□□ 0.46
COL5A2P05997 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC17.94■□□□□ 0.46
COL5A2P05997 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 DDX11L8-201ENST00000535849 366 ntBASIC17.94■□□□□ 0.46
COL5A2P05997 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC17.94■□□□□ 0.46
COL5A2P05997 AC144831.1-201ENST00000573312 2656 ntBASIC17.93■□□□□ 0.46
COL5A2P05997 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL5A2P05997 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
COL5A2P05997 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL5A2P05997 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.93■□□□□ 0.46
COL5A2P05997 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
COL5A2P05997 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
COL5A2P05997 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC17.93■□□□□ 0.46
COL5A2P05997 AK2P2-201ENST00000439142 405 ntBASIC17.93■□□□□ 0.46
COL5A2P05997 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC17.93■□□□□ 0.46
COL5A2P05997 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC17.93■□□□□ 0.46
COL5A2P05997 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC17.93■□□□□ 0.46
COL5A2P05997 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC17.93■□□□□ 0.46
COL5A2P05997 AL109954.3-201ENST00000615088 558 ntBASIC17.93■□□□□ 0.46
COL5A2P05997 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL5A2P05997 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
COL5A2P05997 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL5A2P05997 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL5A2P05997 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC17.92■□□□□ 0.46
COL5A2P05997 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
COL5A2P05997 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
COL5A2P05997 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC17.92■□□□□ 0.46
COL5A2P05997 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC17.92■□□□□ 0.46
COL5A2P05997 IQCF4-203ENST00000428561 420 ntBASIC17.92■□□□□ 0.46
COL5A2P05997 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC17.92■□□□□ 0.46
COL5A2P05997 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC17.92■□□□□ 0.46
COL5A2P05997 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC17.92■□□□□ 0.46
COL5A2P05997 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC17.92■□□□□ 0.46
COL5A2P05997 CCNL2P1-201ENST00000512846 969 ntBASIC17.92■□□□□ 0.46
COL5A2P05997 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL5A2P05997 AC084262.1-201ENST00000567818 751 ntBASIC17.92■□□□□ 0.46
COL5A2P05997 RN7SL202P-201ENST00000584410 262 ntBASIC17.92■□□□□ 0.46
COL5A2P05997 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 AC134878.2-201ENST00000620700 1265 ntBASIC17.92■□□□□ 0.46
COL5A2P05997 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.92■□□□□ 0.46
COL5A2P05997 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL5A2P05997 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
COL5A2P05997 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
COL5A2P05997 ATF4P4-201ENST00000393544 1930 ntBASIC17.91■□□□□ 0.46
COL5A2P05997 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.91■□□□□ 0.46
COL5A2P05997 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.91■□□□□ 0.46
COL5A2P05997 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC17.91■□□□□ 0.46
COL5A2P05997 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
COL5A2P05997 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL5A2P05997 NME1-209ENST00000511355 1645 ntTSL 5 BASIC17.91■□□□□ 0.46
COL5A2P05997 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms