Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 ST13P19-201ENST00000442505 1124 ntBASIC12.6□□□□□ -0.39
APOC1P02654 KRT18P15-201ENST00000458108 1291 ntBASIC12.6□□□□□ -0.39
APOC1P02654 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 AC100827.2-201ENST00000563214 1194 ntBASIC12.6□□□□□ -0.39
APOC1P02654 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 AC090386.2-201ENST00000623010 1039 ntBASIC12.6□□□□□ -0.39
APOC1P02654 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
APOC1P02654 PDIA3P1-201ENST00000471856 1510 ntBASIC12.6□□□□□ -0.39
APOC1P02654 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.6□□□□□ -0.39
APOC1P02654 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
APOC1P02654 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 AL590824.1-201ENST00000403828 1349 ntBASIC12.6□□□□□ -0.39
APOC1P02654 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC1P02654 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
APOC1P02654 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
APOC1P02654 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.59□□□□□ -0.39
APOC1P02654 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
APOC1P02654 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 TMBIM7P-202ENST00000641474 1516 ntBASIC12.59□□□□□ -0.39
APOC1P02654 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC1P02654 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC1P02654 AL645933.1-201ENST00000440087 609 ntBASIC12.59□□□□□ -0.39
APOC1P02654 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC1P02654 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.59□□□□□ -0.39
APOC1P02654 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC1P02654 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 AC005225.4-201ENST00000557330 545 ntBASIC12.59□□□□□ -0.39
APOC1P02654 AP006547.1-201ENST00000563435 692 ntBASIC12.59□□□□□ -0.39
APOC1P02654 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC1P02654 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
APOC1P02654 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC1P02654 BAP1-211ENST00000615113 489 ntBASIC12.59□□□□□ -0.39
APOC1P02654 AL162274.1-201ENST00000617191 1098 ntBASIC12.59□□□□□ -0.39
APOC1P02654 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 AC090114.2-201ENST00000608477 7054 ntBASIC12.59□□□□□ -0.39
APOC1P02654 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
APOC1P02654 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms