Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
APOA1P02647 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.64□□□□□ -0.39
APOA1P02647 AK2P2-201ENST00000439142 405 ntBASIC12.64□□□□□ -0.39
APOA1P02647 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 AC026410.3-201ENST00000514280 936 ntBASIC12.64□□□□□ -0.39
APOA1P02647 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.64□□□□□ -0.39
APOA1P02647 TIMM17BP1-201ENST00000545713 516 ntBASIC12.64□□□□□ -0.39
APOA1P02647 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.64□□□□□ -0.39
APOA1P02647 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.64□□□□□ -0.39
APOA1P02647 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.64□□□□□ -0.39
APOA1P02647 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 GOLGA8CP-201ENST00000446144 5237 ntBASIC12.64□□□□□ -0.39
APOA1P02647 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.64□□□□□ -0.39
APOA1P02647 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
APOA1P02647 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOA1P02647 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.64□□□□□ -0.39
APOA1P02647 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 AL928654.5-201ENST00000624831 2501 ntBASIC12.63□□□□□ -0.39
APOA1P02647 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
APOA1P02647 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
APOA1P02647 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 AC145098.2-201ENST00000623593 3026 ntBASIC12.63□□□□□ -0.39
APOA1P02647 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.63□□□□□ -0.39
APOA1P02647 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 USP17L6P-201ENST00000382470 1197 ntBASIC12.63□□□□□ -0.39
APOA1P02647 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 SPDYE7P-202ENST00000420373 878 ntBASIC12.63□□□□□ -0.39
APOA1P02647 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.63□□□□□ -0.39
APOA1P02647 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
APOA1P02647 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.63□□□□□ -0.39
APOA1P02647 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.63□□□□□ -0.39
APOA1P02647 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.63□□□□□ -0.39
APOA1P02647 AC093520.2-201ENST00000561830 333 ntBASIC12.63□□□□□ -0.39
APOA1P02647 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.63□□□□□ -0.39
APOA1P02647 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
APOA1P02647 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 AP001002.3-201ENST00000623482 206 ntBASIC12.63□□□□□ -0.39
APOA1P02647 AL158212.4-201ENST00000624062 1286 ntBASIC12.63□□□□□ -0.39
APOA1P02647 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms