Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 AC011474.4-201ENST00000623523 2076 ntBASIC14.19□□□□□ -0.14
SMAD6O43541 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SMAD6O43541 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SMAD6O43541 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.19□□□□□ -0.14
SMAD6O43541 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 FMO6P-201ENST00000236166 1620 ntBASIC14.19□□□□□ -0.14
SMAD6O43541 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.19□□□□□ -0.14
SMAD6O43541 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMAD6O43541 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMAD6O43541 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.18□□□□□ -0.14
SMAD6O43541 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMAD6O43541 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SMAD6O43541 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.18□□□□□ -0.14
SMAD6O43541 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.18□□□□□ -0.14
SMAD6O43541 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.18□□□□□ -0.14
SMAD6O43541 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.18□□□□□ -0.14
SMAD6O43541 STK24P1-201ENST00000455035 1291 ntBASIC14.18□□□□□ -0.14
SMAD6O43541 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
SMAD6O43541 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.18□□□□□ -0.14
SMAD6O43541 RN7SL470P-201ENST00000583069 259 ntBASIC14.18□□□□□ -0.14
SMAD6O43541 AP005264.5-201ENST00000590066 467 ntBASIC14.18□□□□□ -0.14
SMAD6O43541 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SMAD6O43541 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.18□□□□□ -0.14
SMAD6O43541 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMAD6O43541 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SMAD6O43541 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.18□□□□□ -0.14
SMAD6O43541 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SMAD6O43541 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMAD6O43541 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.17□□□□□ -0.14
SMAD6O43541 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.17□□□□□ -0.14
SMAD6O43541 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.17□□□□□ -0.14
SMAD6O43541 AC092978.1-202ENST00000637590 1327 ntBASIC14.17□□□□□ -0.14
SMAD6O43541 AC093462.1-201ENST00000621167 1683 ntBASIC14.17□□□□□ -0.14
SMAD6O43541 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SMAD6O43541 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 OR52M2P-201ENST00000414298 959 ntBASIC14.17□□□□□ -0.14
SMAD6O43541 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.17□□□□□ -0.14
SMAD6O43541 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.17□□□□□ -0.14
SMAD6O43541 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.17□□□□□ -0.14
SMAD6O43541 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 DPY19L2P5-201ENST00000456300 331 ntBASIC14.17□□□□□ -0.14
SMAD6O43541 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SMAD6O43541 AC104784.1-201ENST00000473096 294 ntBASIC14.17□□□□□ -0.14
SMAD6O43541 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.17□□□□□ -0.14
SMAD6O43541 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.17□□□□□ -0.14
SMAD6O43541 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
SMAD6O43541 RN7SL736P-201ENST00000613111 269 ntBASIC14.17□□□□□ -0.14
SMAD6O43541 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.17□□□□□ -0.14
SMAD6O43541 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms