Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.07■□□□□ 0
O00370 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
O00370 AP001505.2-201ENST00000616815 443 ntBASIC15.07■□□□□ 0
O00370 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
O00370 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.07■□□□□ 0
O00370 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
O00370 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.07■□□□□ 0
O00370 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.07■□□□□ 0
O00370 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.07■□□□□ 0
O00370 AC005562.1-201ENST00000583030 3219 ntBASIC15.07■□□□□ 0
O00370 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
O00370 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
O00370 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
O00370 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
O00370 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.06■□□□□ 0
O00370 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
O00370 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.06■□□□□ 0
O00370 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
O00370 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.06■□□□□ 0
O00370 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.06■□□□□ 0
O00370 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 PDIA3P2-201ENST00000428073 158 ntBASIC15.06■□□□□ 0
O00370 AC006335.1-201ENST00000445200 547 ntBASIC15.06■□□□□ 0
O00370 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.06■□□□□ 0
O00370 AC012618.1-201ENST00000461223 412 ntBASIC15.06■□□□□ 0
O00370 GOLGA2P8-201ENST00000505201 779 ntBASIC15.06■□□□□ 0
O00370 POU5F1P2-201ENST00000521750 823 ntBASIC15.06■□□□□ 0
O00370 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.06■□□□□ 0
O00370 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.06■□□□□ 0
O00370 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.06■□□□□ 0
O00370 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
O00370 PHBP15-201ENST00000574228 665 ntBASIC15.06■□□□□ 0
O00370 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.06■□□□□ 0
O00370 MIR3619-201ENST00000579667 83 ntBASIC15.06■□□□□ 0
O00370 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.06■□□□□ 0
O00370 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.06■□□□□ 0
O00370 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
O00370 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
O00370 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
O00370 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
O00370 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.06■□□□□ 0
O00370 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.05■□□□□ 0
O00370 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.05■□□□□ 0
O00370 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
O00370 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
O00370 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.05■□□□□ 0
O00370 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.05■□□□□ 0
O00370 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
O00370 KRT17P5-201ENST00000332088 839 ntBASIC15.05■□□□□ -0
O00370 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.05■□□□□ -0
O00370 ELK2AP-201ENST00000392510 1007 ntBASIC15.05■□□□□ -0
O00370 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
O00370 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.05■□□□□ -0
O00370 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.05■□□□□ -0
O00370 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.05■□□□□ -0
O00370 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.05■□□□□ -0
O00370 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.05■□□□□ -0
O00370 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.05■□□□□ -0
O00370 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.05■□□□□ -0
O00370 AL109837.1-201ENST00000603272 613 ntBASIC15.05■□□□□ -0
O00370 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.05■□□□□ -0
O00370 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.05■□□□□ -0
O00370 MIR6769A-201ENST00000617340 73 ntBASIC15.05■□□□□ -0
O00370 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.05■□□□□ -0
O00370 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.05■□□□□ -0
O00370 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
O00370 RCC2P1-201ENST00000452257 1476 ntBASIC15.05■□□□□ -0
O00370 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.05■□□□□ -0
O00370 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.05■□□□□ -0
O00370 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms