Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 FPGT-205ENST00000482102 561 ntTSL 4 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 FP325317.1-201ENST00000539936 1042 ntBASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 AC015818.3-201ENST00000583797 589 ntBASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 AC002350.2-201ENST00000623894 1828 ntBASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 DOC2GP-204ENST00000639052 2548 ntBASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TMEM88BA6NKF7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 SNORA30.1-201ENST00000363193 129 ntBASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 AL356653.1-201ENST00000402743 360 ntBASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 CXXC1P1-202ENST00000489409 1212 ntBASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 RAB42P1-201ENST00000555078 316 ntBASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM88BA6NKF7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AC008741.2-201ENST00000612792 3115 ntBASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AC245140.2-201ENST00000624054 1939 ntBASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 TPM3P7-201ENST00000338274 732 ntBASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms