Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 TUBB1P2-201ENST00000422712 1306 ntBASIC14.39□□□□□ -0.11
CCDC78A2IDD5 TUBB1P1-201ENST00000503144 1300 ntBASIC14.39□□□□□ -0.11
CCDC78A2IDD5 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AGAP12P-201ENST00000585227 2359 ntBASIC14.38□□□□□ -0.11
CCDC78A2IDD5 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.38□□□□□ -0.11
CCDC78A2IDD5 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 BNIP3P13-201ENST00000599968 566 ntBASIC14.38□□□□□ -0.11
CCDC78A2IDD5 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AC022748.3-201ENST00000621828 275 ntBASIC14.38□□□□□ -0.11
CCDC78A2IDD5 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AC090386.2-201ENST00000623010 1039 ntBASIC14.38□□□□□ -0.11
CCDC78A2IDD5 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AL359183.1-201ENST00000623796 2132 ntBASIC14.38□□□□□ -0.11
CCDC78A2IDD5 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC78A2IDD5 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 HLA-J-204ENST00000495278 958 ntBASIC14.37□□□□□ -0.11
CCDC78A2IDD5 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC78A2IDD5 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms