Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 POM121L10P-201ENST00000436994 1285 ntBASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AL160314.3-201ENST00000556041 767 ntBASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AC124068.2-201ENST00000569473 1109 ntBASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AL096828.3-201ENST00000615354 462 ntBASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AL118506.1-201ENST00000601296 3082 ntBASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 GOLGA2P4-201ENST00000441462 777 ntBASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AC005730.2-201ENST00000564549 1184 ntBASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AC008805.1-201ENST00000590892 364 ntBASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 KLK3-211ENST00000597483 810 ntTSL 2 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms