Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 AC232323.1-201ENST00000540724 2099 ntBASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 RNA5SP491-201ENST00000362936 118 ntBASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 MIR632-201ENST00000385193 94 ntBASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 RNA5SP288-201ENST00000516075 93 ntBASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 MIR8071-1-201ENST00000616769 65 ntBASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 MIR8071-2-201ENST00000616772 65 ntBASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZC3H4Q9UPT8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 YY1P2-201ENST00000438766 948 ntBASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 PSME2P2-201ENST00000453033 700 ntBASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 FAM86JP-202ENST00000484500 988 ntBASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 CCNL2P1-201ENST00000512846 969 ntBASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 SRPK2P-201ENST00000523408 1100 ntBASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 AC010202.1-201ENST00000551181 405 ntBASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 AC139749.1-202ENST00000617529 3139 ntBASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.84■□□□□ 0.29
ZC3H4Q9UPT8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ZC3H4Q9UPT8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZC3H4Q9UPT8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZC3H4Q9UPT8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.83■□□□□ 0.29
ZC3H4Q9UPT8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ZC3H4Q9UPT8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZC3H4Q9UPT8 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms