Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 MARK2P16-201ENST00000605714 1723 ntBASIC14.15□□□□□ -0.14
SPASTQ9UBP0 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AP002353.1-201ENST00000528257 1599 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AL512430.1-201ENST00000392575 860 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC079112.1-201ENST00000454972 939 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC104784.1-201ENST00000473096 294 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 RN7SL277P-201ENST00000481521 288 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 KRT8P1-201ENST00000557533 1207 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 RN7SL555P-201ENST00000584742 339 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC138894.2-201ENST00000602838 371 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC087045.2-201ENST00000606279 1003 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC087392.5-201ENST00000612517 489 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC242376.2-201ENST00000619355 883 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC090386.2-201ENST00000623010 1039 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC092978.1-202ENST00000637590 1327 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPASTQ9UBP0 AC152010.1-201ENST00000415779 2006 ntBASIC14.14□□□□□ -0.15
SPASTQ9UBP0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 AC005252.3-201ENST00000623855 2258 ntBASIC14.13□□□□□ -0.15
SPASTQ9UBP0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms