Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.8□□□□□ -0.04
PPARGC1AQ9UBK2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPARGC1AQ9UBK2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PPARGC1AQ9UBK2 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.8□□□□□ -0.04
PPARGC1AQ9UBK2 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PPARGC1AQ9UBK2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPARGC1AQ9UBK2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 LINC01165-201ENST00000445190 1623 ntBASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 AL596276.2-201ENST00000447525 331 ntBASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 SPTLC1P5-201ENST00000450718 252 ntBASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PPARGC1AQ9UBK2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 MIR769-201ENST00000390225 118 ntBASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 AC090857.1-201ENST00000527400 390 ntBASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 AL139099.5-201ENST00000635274 300 ntBASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PPARGC1AQ9UBK2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms