Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RSPO3Q9BXY4 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
RSPO3Q9BXY4 AC245140.2-201ENST00000624054 1939 ntBASIC12.9□□□□□ -0.35
RSPO3Q9BXY4 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AC020763.3-201ENST00000625095 2904 ntBASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AC007274.1-201ENST00000439805 662 ntBASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AC126915.1-201ENST00000522847 1038 ntBASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 KRT8P21-201ENST00000430398 1491 ntBASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 AC024075.2-201ENST00000598112 1473 ntBASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 POM121L14P-201ENST00000406100 1558 ntBASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RSPO3Q9BXY4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AL118506.1-201ENST00000601296 3082 ntBASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 MIR1908-201ENST00000410394 80 ntBASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.88□□□□□ -0.35
RSPO3Q9BXY4 RCC2P8-201ENST00000502779 1035 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms