Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 KRT8P4-201ENST00000509735 1454 ntBASIC12.19□□□□□ -0.46
NICN1Q9BSH3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AL008718.2-201ENST00000609206 1313 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 REXO1L6P-201ENST00000603433 1515 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 MIR326-201ENST00000362220 95 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AL136309.1-201ENST00000403917 691 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AC010141.1-201ENST00000411585 623 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 C2orf27AP3-201ENST00000434123 579 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AC092183.1-201ENST00000469884 875 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AL136301.1-201ENST00000615830 422 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AL354718.3-201ENST00000616414 581 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 CR382287.1-201ENST00000623954 586 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 LAP3P2-201ENST00000454686 1454 ntBASIC12.18□□□□□ -0.46
NICN1Q9BSH3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
NICN1Q9BSH3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 SHC1P1-201ENST00000425230 1745 ntBASIC12.17□□□□□ -0.46
NICN1Q9BSH3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.17□□□□□ -0.46
NICN1Q9BSH3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms