Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.62□□□□□ -0.39
VRK1Q99986 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.62□□□□□ -0.39
VRK1Q99986 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.62□□□□□ -0.39
VRK1Q99986 AC004923.1-202ENST00000642106 209 ntBASIC12.62□□□□□ -0.39
VRK1Q99986 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.62□□□□□ -0.39
VRK1Q99986 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.62□□□□□ -0.39
VRK1Q99986 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VRK1Q99986 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VRK1Q99986 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VRK1Q99986 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 AC114271.1-201ENST00000612689 2813 ntBASIC12.61□□□□□ -0.39
VRK1Q99986 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
VRK1Q99986 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VRK1Q99986 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VRK1Q99986 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 AC104073.2-201ENST00000453737 312 ntBASIC12.61□□□□□ -0.39
VRK1Q99986 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.61□□□□□ -0.39
VRK1Q99986 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.61□□□□□ -0.39
VRK1Q99986 AC013355.1-201ENST00000562625 723 ntBASIC12.61□□□□□ -0.39
VRK1Q99986 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.61□□□□□ -0.39
VRK1Q99986 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.61□□□□□ -0.39
VRK1Q99986 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.61□□□□□ -0.39
VRK1Q99986 AL021578.1-201ENST00000613646 709 ntBASIC12.61□□□□□ -0.39
VRK1Q99986 AL162426.1-201ENST00000624141 743 ntBASIC12.61□□□□□ -0.39
VRK1Q99986 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.61□□□□□ -0.39
VRK1Q99986 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.61□□□□□ -0.39
VRK1Q99986 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VRK1Q99986 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 AC004241.5-201ENST00000623870 2448 ntBASIC12.61□□□□□ -0.39
VRK1Q99986 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VRK1Q99986 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VRK1Q99986 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VRK1Q99986 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms