Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.73□□□□□ -0.37
PHF3Q92576 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 AC006987.1-201ENST00000413610 527 ntBASIC12.73□□□□□ -0.37
PHF3Q92576 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.73□□□□□ -0.37
PHF3Q92576 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 DUX4L50-201ENST00000455245 715 ntBASIC12.73□□□□□ -0.37
PHF3Q92576 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.73□□□□□ -0.37
PHF3Q92576 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC12.73□□□□□ -0.37
PHF3Q92576 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.73□□□□□ -0.37
PHF3Q92576 AC005586.2-201ENST00000563946 837 ntBASIC12.73□□□□□ -0.37
PHF3Q92576 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.73□□□□□ -0.37
PHF3Q92576 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.73□□□□□ -0.37
PHF3Q92576 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PHF3Q92576 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.73□□□□□ -0.37
PHF3Q92576 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.73□□□□□ -0.37
PHF3Q92576 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.73□□□□□ -0.37
PHF3Q92576 AGAP10P-201ENST00000454844 2418 ntBASIC12.73□□□□□ -0.37
PHF3Q92576 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.73□□□□□ -0.37
PHF3Q92576 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PHF3Q92576 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
PHF3Q92576 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.73□□□□□ -0.37
PHF3Q92576 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PHF3Q92576 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
PHF3Q92576 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 ERP29P1-201ENST00000442902 706 ntBASIC12.72□□□□□ -0.37
PHF3Q92576 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 LYPLA2P1-203ENST00000447689 696 ntBASIC12.72□□□□□ -0.37
PHF3Q92576 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.72□□□□□ -0.37
PHF3Q92576 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.72□□□□□ -0.37
PHF3Q92576 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.72□□□□□ -0.37
PHF3Q92576 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.72□□□□□ -0.37
PHF3Q92576 LAP3P2-201ENST00000454686 1454 ntBASIC12.72□□□□□ -0.37
PHF3Q92576 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.72□□□□□ -0.37
PHF3Q92576 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
PHF3Q92576 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PHF3Q92576 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.72□□□□□ -0.37
PHF3Q92576 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
PHF3Q92576 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.72□□□□□ -0.37
PHF3Q92576 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 AL139008.1-201ENST00000437894 228 ntBASIC12.72□□□□□ -0.37
PHF3Q92576 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.72□□□□□ -0.37
PHF3Q92576 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.72□□□□□ -0.37
PHF3Q92576 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
PHF3Q92576 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.72□□□□□ -0.37
PHF3Q92576 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.72□□□□□ -0.37
PHF3Q92576 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 MIR6858-201ENST00000620733 67 ntBASIC12.72□□□□□ -0.37
PHF3Q92576 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.72□□□□□ -0.37
PHF3Q92576 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PHF3Q92576 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PHF3Q92576 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms