Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 CCL25-202ENST00000315626 450 ntTSL 2 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 SNRPCP15-201ENST00000424055 192 ntBASIC16.74■□□□□ 0.27
SNED1Q8TER0 PEBP1P3-201ENST00000455475 548 ntBASIC16.74■□□□□ 0.27
SNED1Q8TER0 B9D1-206ENST00000461069 923 ntTSL 2 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 RN7SL480P-201ENST00000581481 294 ntBASIC16.74■□□□□ 0.27
SNED1Q8TER0 BAP1-211ENST00000615113 489 ntBASIC16.74■□□□□ 0.27
SNED1Q8TER0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.74■□□□□ 0.27
SNED1Q8TER0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNED1Q8TER0 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 FAU-201ENST00000279259 461 ntTSL 2 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 RN7SKP212-201ENST00000410851 328 ntBASIC16.73■□□□□ 0.27
SNED1Q8TER0 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 DNM1P46-202ENST00000415963 882 ntBASIC16.73■□□□□ 0.27
SNED1Q8TER0 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 AC005077.3-201ENST00000449614 213 ntBASIC16.73■□□□□ 0.27
SNED1Q8TER0 RN7SL846P-201ENST00000467429 292 ntBASIC16.73■□□□□ 0.27
SNED1Q8TER0 AC104212.2-201ENST00000478813 628 ntBASIC16.73■□□□□ 0.27
SNED1Q8TER0 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 AC020922.4-201ENST00000621389 339 ntBASIC16.73■□□□□ 0.27
SNED1Q8TER0 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.73■□□□□ 0.27
SNED1Q8TER0 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.73■□□□□ 0.27
SNED1Q8TER0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNED1Q8TER0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNED1Q8TER0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNED1Q8TER0 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNED1Q8TER0 RBP4-203ENST00000371469 814 ntTSL 5 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 RN7SL173P-201ENST00000461853 292 ntBASIC16.72■□□□□ 0.27
SNED1Q8TER0 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 AC137723.2-201ENST00000623540 398 ntBASIC16.72■□□□□ 0.27
SNED1Q8TER0 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 AC138627.1-201ENST00000641127 1257 ntBASIC16.72■□□□□ 0.27
SNED1Q8TER0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNED1Q8TER0 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
SNED1Q8TER0 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNED1Q8TER0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNED1Q8TER0 AL121753.2-201ENST00000624581 1461 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms