Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RN7SL720P-201ENST00000488178 304 ntBASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 GOLGA2P8-201ENST00000505201 779 ntBASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMARCC2Q8TAQ2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMARCC2Q8TAQ2 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC009474.1-201ENST00000455096 1565 ntBASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 RNA5SP359-201ENST00000364838 113 ntBASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SNORA50C-201ENST00000408535 133 ntBASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 IMP3P2-201ENST00000489760 475 ntBASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AL606495.2-201ENST00000605867 535 ntBASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SNORA50.1-201ENST00000628590 135 ntBASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 AC015909.3-201ENST00000572855 1794 ntBASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMARCC2Q8TAQ2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.5■□□□□ 0.23
SMARCC2Q8TAQ2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms