Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP43Q8NFH3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 KRT8P21-201ENST00000430398 1491 ntBASIC13.24□□□□□ -0.29
NUP43Q8NFH3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.24□□□□□ -0.29
NUP43Q8NFH3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 CHCHD2P2-201ENST00000503744 321 ntBASIC13.24□□□□□ -0.29
NUP43Q8NFH3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 AC093752.3-201ENST00000567343 901 ntBASIC13.24□□□□□ -0.29
NUP43Q8NFH3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 AL118558.3-201ENST00000607414 1079 ntBASIC13.24□□□□□ -0.29
NUP43Q8NFH3 AL022334.2-201ENST00000610000 484 ntBASIC13.24□□□□□ -0.29
NUP43Q8NFH3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NUP43Q8NFH3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 CICP17-201ENST00000418553 2377 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AC073869.1-201ENST00000415574 2762 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 RN7SKP214-201ENST00000364208 315 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AL391647.1-201ENST00000395664 511 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AC004898.1-201ENST00000451057 766 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AC125604.1-201ENST00000496255 707 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms