Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 KRT8P1-201ENST00000557533 1207 ntBASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 AC093752.3-201ENST00000567343 901 ntBASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 AC007326.1-201ENST00000604539 458 ntBASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM48Q8IWZ4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 CCT8L1P-201ENST00000465400 1674 ntBASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 RPS9P1-201ENST00000419943 583 ntBASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AC016629.1-201ENST00000596579 586 ntBASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AC007718.1-201ENST00000621078 280 ntBASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AC015802.1-201ENST00000588104 1449 ntBASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM48Q8IWZ4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRIM48Q8IWZ4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms