Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AC041040.1-201ENST00000425197 460 ntBASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AC120057.1-201ENST00000483947 663 ntBASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AC113385.2-201ENST00000614465 762 ntBASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 AC140479.7-201ENST00000636301 2332 ntBASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.94□□□□□ -0.02
NPAS4Q8IUM7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 AL161772.1-201ENST00000610494 4412 ntBASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 Z98885.3-201ENST00000624882 1757 ntBASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 AC092896.1-201ENST00000465850 380 ntBASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 IGHEP2-201ENST00000519308 1256 ntBASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 AC027139.1-201ENST00000565286 951 ntBASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS4Q8IUM7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 PGAM1P11-201ENST00000416729 680 ntBASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 AC007279.1-201ENST00000448547 837 ntBASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.92□□□□□ -0.02
NPAS4Q8IUM7 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms