Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 AC046158.3-201ENST00000624947 2558 ntBASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 CLUHP3-207ENST00000563678 1303 ntBASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZFHX4Q86UP3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AL157996.1-201ENST00000624684 2299 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 CMC2-202ENST00000486645 766 ntTSL 3 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 HNRNPA1P11-201ENST00000580106 956 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 MIR4326-201ENST00000582203 59 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 HNRNPA3P12-201ENST00000437410 1063 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AL512310.5-201ENST00000551999 515 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AL596257.1-201ENST00000641463 2694 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 SDCBP2P1-201ENST00000416115 614 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 EEF1GP1-201ENST00000457231 1299 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 PHBP18-201ENST00000546648 813 ntBASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZFHX4Q86UP3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 PRAMEF35P-201ENST00000458709 891 ntBASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 KRT18P42-201ENST00000505048 1255 ntBASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZFHX4Q86UP3 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms