Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC005722.1-201ENST00000431878 964 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 BRI3P1-201ENST00000440440 378 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC104212.2-201ENST00000478813 628 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 RPS18P9-201ENST00000482817 460 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC004686.1-201ENST00000605113 538 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 PHF23-213ENST00000613632 850 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC048382.6-201ENST00000621980 1223 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC067750.1-201ENST00000608826 6545 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 WASH7P-201ENST00000488147 1351 ntBASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD4Q5XG99 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 AC092810.2-201ENST00000431570 362 ntBASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 KRT19P4-201ENST00000443208 943 ntBASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 HIST1H2APS2-201ENST00000454426 370 ntBASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 AC079250.1-201ENST00000456046 531 ntBASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 AC120498.7-201ENST00000562876 330 ntBASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 RN7SL524P-201ENST00000581152 300 ntBASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms