Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TSR1Q2NL82 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 ACTG1P3-201ENST00000431775 1114 ntBASIC15.66■□□□□ 0.1
TSR1Q2NL82 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 TDH-203ENST00000531764 1110 ntBASIC15.66■□□□□ 0.1
TSR1Q2NL82 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 AL356585.2-201ENST00000625078 2396 ntBASIC15.66■□□□□ 0.1
TSR1Q2NL82 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TSR1Q2NL82 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TSR1Q2NL82 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.66■□□□□ 0.1
TSR1Q2NL82 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TSR1Q2NL82 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TSR1Q2NL82 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TSR1Q2NL82 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 TNRC18P1-201ENST00000502875 3650 ntBASIC15.65■□□□□ 0.1
TSR1Q2NL82 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 AP000568.1-201ENST00000282964 442 ntBASIC15.65■□□□□ 0.1
TSR1Q2NL82 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 FAM8A4P-201ENST00000435433 1213 ntBASIC15.65■□□□□ 0.1
TSR1Q2NL82 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 AC007041.1-201ENST00000438989 1155 ntBASIC15.65■□□□□ 0.1
TSR1Q2NL82 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 MSTO2P-201ENST00000314835 1709 ntBASIC15.65■□□□□ 0.1
TSR1Q2NL82 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 MARK2P9-201ENST00000430958 1727 ntBASIC15.65■□□□□ 0.1
TSR1Q2NL82 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.65■□□□□ 0.1
TSR1Q2NL82 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TSR1Q2NL82 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
TSR1Q2NL82 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TSR1Q2NL82 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TSR1Q2NL82 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TSR1Q2NL82 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TSR1Q2NL82 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.64■□□□□ 0.09
TSR1Q2NL82 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TSR1Q2NL82 AP006294.1-201ENST00000415407 339 ntBASIC15.64■□□□□ 0.09
TSR1Q2NL82 CD8B2-202ENST00000417670 633 ntBASIC15.64■□□□□ 0.09
TSR1Q2NL82 NME2P1-201ENST00000426182 414 ntBASIC15.64■□□□□ 0.09
TSR1Q2NL82 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TSR1Q2NL82 KRT17P7-201ENST00000451704 1104 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms