Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H3AP68431 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H3AP68431 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 ACTBP11-201ENST00000436287 1126 ntBASIC12.35□□□□□ -0.43
HIST1H3AP68431 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 AC108725.1-201ENST00000495472 409 ntBASIC12.35□□□□□ -0.43
HIST1H3AP68431 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 AL451050.2-201ENST00000606967 682 ntBASIC12.35□□□□□ -0.43
HIST1H3AP68431 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.35□□□□□ -0.43
HIST1H3AP68431 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HIST1H3AP68431 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PEG13-201ENST00000631594 5667 ntBASIC12.34□□□□□ -0.43
HIST1H3AP68431 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 DMBT1P1-203ENST00000636837 4628 ntBASIC12.34□□□□□ -0.43
HIST1H3AP68431 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 OR8T1P-201ENST00000421347 918 ntBASIC12.34□□□□□ -0.43
HIST1H3AP68431 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 KRT8P1-201ENST00000557533 1207 ntBASIC12.34□□□□□ -0.43
HIST1H3AP68431 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 AC026740.1-201ENST00000607068 791 ntBASIC12.34□□□□□ -0.43
HIST1H3AP68431 AL118558.3-201ENST00000607414 1079 ntBASIC12.34□□□□□ -0.43
HIST1H3AP68431 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms