Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.93■□□□□ 0.14
TPM4P67936 OR10B1P-201ENST00000601666 907 ntBASIC15.93■□□□□ 0.14
TPM4P67936 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.93■□□□□ 0.14
TPM4P67936 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM4P67936 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TPM4P67936 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TPM4P67936 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
TPM4P67936 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
TPM4P67936 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM4P67936 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM4P67936 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TPM4P67936 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM4P67936 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TPM4P67936 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM4P67936 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM4P67936 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM4P67936 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM4P67936 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TPM4P67936 AC010970.1-201ENST00000445125 1848 ntBASIC15.92■□□□□ 0.14
TPM4P67936 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM4P67936 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM4P67936 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TPM4P67936 HMGA1P1-201ENST00000415560 1062 ntBASIC15.92■□□□□ 0.14
TPM4P67936 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM4P67936 FAM8A4P-201ENST00000435433 1213 ntBASIC15.92■□□□□ 0.14
TPM4P67936 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM4P67936 RNA5SP421-201ENST00000516864 134 ntBASIC15.92■□□□□ 0.14
TPM4P67936 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM4P67936 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM4P67936 CHCHD2P3-201ENST00000603038 451 ntBASIC15.92■□□□□ 0.14
TPM4P67936 LINC01165-201ENST00000445190 1623 ntBASIC15.92■□□□□ 0.14
TPM4P67936 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TPM4P67936 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TPM4P67936 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM4P67936 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM4P67936 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TPM4P67936 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM4P67936 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TPM4P67936 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
TPM4P67936 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM4P67936 AC125807.2-201ENST00000513358 3514 ntBASIC15.91■□□□□ 0.14
TPM4P67936 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 LINC00567-201ENST00000569854 3409 ntBASIC15.91■□□□□ 0.14
TPM4P67936 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM4P67936 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TPM4P67936 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM4P67936 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TPM4P67936 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM4P67936 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM4P67936 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.91■□□□□ 0.14
TPM4P67936 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.91■□□□□ 0.14
TPM4P67936 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM4P67936 AL512310.5-201ENST00000551999 515 ntBASIC15.91■□□□□ 0.14
TPM4P67936 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM4P67936 WFDC1-204ENST00000613603 549 ntBASIC15.91■□□□□ 0.14
TPM4P67936 AC106028.4-201ENST00000614509 607 ntBASIC15.91■□□□□ 0.14
TPM4P67936 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM4P67936 AC132938.4-201ENST00000623835 848 ntBASIC15.91■□□□□ 0.14
TPM4P67936 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM4P67936 AL033527.5-201ENST00000641382 801 ntBASIC15.91■□□□□ 0.14
TPM4P67936 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
TPM4P67936 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM4P67936 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms