Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CLK1P49759 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.42□□□□□ -0.26
CLK1P49759 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.42□□□□□ -0.26
CLK1P49759 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.42□□□□□ -0.26
CLK1P49759 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CLK1P49759 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CLK1P49759 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.42□□□□□ -0.26
CLK1P49759 GPR53P-205ENST00000457298 1084 ntBASIC13.42□□□□□ -0.26
CLK1P49759 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.42□□□□□ -0.26
CLK1P49759 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.42□□□□□ -0.26
CLK1P49759 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.42□□□□□ -0.26
CLK1P49759 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.42□□□□□ -0.26
CLK1P49759 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.42□□□□□ -0.26
CLK1P49759 RN7SL713P-201ENST00000582127 302 ntBASIC13.42□□□□□ -0.26
CLK1P49759 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.42□□□□□ -0.26
CLK1P49759 AL512343.1-201ENST00000605837 169 ntBASIC13.42□□□□□ -0.26
CLK1P49759 ZACNP1-201ENST00000612259 710 ntBASIC13.42□□□□□ -0.26
CLK1P49759 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CLK1P49759 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.42□□□□□ -0.26
CLK1P49759 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 AL354989.2-201ENST00000435838 1540 ntBASIC13.42□□□□□ -0.26
CLK1P49759 PDIA3P1-201ENST00000471856 1510 ntBASIC13.42□□□□□ -0.26
CLK1P49759 AC011840.2-201ENST00000563063 1520 ntBASIC13.42□□□□□ -0.26
CLK1P49759 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.42□□□□□ -0.26
CLK1P49759 RN7SL832P-201ENST00000607781 1756 ntBASIC13.42□□□□□ -0.26
CLK1P49759 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.42□□□□□ -0.26
CLK1P49759 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLK1P49759 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.42□□□□□ -0.26
CLK1P49759 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CLK1P49759 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CLK1P49759 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC13.42□□□□□ -0.26
CLK1P49759 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.42□□□□□ -0.26
CLK1P49759 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.41□□□□□ -0.26
CLK1P49759 MAPK10-262ENST00000641051 5738 ntBASIC13.41□□□□□ -0.26
CLK1P49759 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLK1P49759 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLK1P49759 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.41□□□□□ -0.26
CLK1P49759 AL136309.1-201ENST00000403917 691 ntBASIC13.41□□□□□ -0.26
CLK1P49759 AC112492.5-201ENST00000421897 457 ntBASIC13.41□□□□□ -0.26
CLK1P49759 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.41□□□□□ -0.26
CLK1P49759 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 U91328.1-201ENST00000437528 223 ntBASIC13.41□□□□□ -0.26
CLK1P49759 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.41□□□□□ -0.26
CLK1P49759 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.41□□□□□ -0.26
CLK1P49759 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.41□□□□□ -0.26
CLK1P49759 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.41□□□□□ -0.26
CLK1P49759 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 COX5BP1-201ENST00000507622 393 ntBASIC13.41□□□□□ -0.26
CLK1P49759 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.41□□□□□ -0.26
CLK1P49759 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.41□□□□□ -0.26
CLK1P49759 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.41□□□□□ -0.26
CLK1P49759 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.41□□□□□ -0.26
CLK1P49759 OR10B1P-201ENST00000601666 907 ntBASIC13.41□□□□□ -0.26
CLK1P49759 AC008687.7-202ENST00000637404 953 ntBASIC13.41□□□□□ -0.26
CLK1P49759 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.41□□□□□ -0.26
CLK1P49759 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.41□□□□□ -0.26
CLK1P49759 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.41□□□□□ -0.26
CLK1P49759 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC13.41□□□□□ -0.26
CLK1P49759 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
CLK1P49759 AL136172.1-201ENST00000598590 1394 ntBASIC13.41□□□□□ -0.26
CLK1P49759 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.41□□□□□ -0.26
CLK1P49759 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CLK1P49759 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.41□□□□□ -0.26
CLK1P49759 CES1P1-201ENST00000421606 1704 ntBASIC13.41□□□□□ -0.26
CLK1P49759 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.41□□□□□ -0.26
CLK1P49759 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
CLK1P49759 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLK1P49759 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.4□□□□□ -0.26
CLK1P49759 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms