Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 AC073869.1-201ENST00000415574 2762 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SLC1A1P43005 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC1A1P43005 BTBD6P1-201ENST00000412176 1267 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC1A1P43005 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 AC022210.1-201ENST00000449856 793 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.8□□□□□ -0.04
SLC1A1P43005 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 SNORD3B-2-202ENST00000571722 791 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC1A1P43005 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
SLC1A1P43005 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 COX11-210ENST00000639671 696 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 AC068587.8-201ENST00000641239 219 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 AC004923.1-202ENST00000642106 209 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 MARK2P16-201ENST00000605714 1723 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SLC1A1P43005 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC1A1P43005 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC1A1P43005 NUTM2HP-201ENST00000442076 2498 ntBASIC14.8□□□□□ -0.04
SLC1A1P43005 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC1A1P43005 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SLC1A1P43005 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC1A1P43005 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC1A1P43005 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SLC1A1P43005 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SLC1A1P43005 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC1A1P43005 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC1A1P43005 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.79□□□□□ -0.04
SLC1A1P43005 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC1A1P43005 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC1A1P43005 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC1A1P43005 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 GPR53P-205ENST00000457298 1084 ntBASIC14.79□□□□□ -0.04
SLC1A1P43005 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC1A1P43005 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC1A1P43005 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC1A1P43005 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC1A1P43005 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC1A1P43005 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms