Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
VARSP26640 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.05□□□□□ -0.16
VARSP26640 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.05□□□□□ -0.16
VARSP26640 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 AL161932.2-201ENST00000435436 679 ntBASIC14.05□□□□□ -0.16
VARSP26640 AL157407.1-201ENST00000435784 904 ntBASIC14.05□□□□□ -0.16
VARSP26640 AL645933.1-201ENST00000440087 609 ntBASIC14.05□□□□□ -0.16
VARSP26640 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC14.05□□□□□ -0.16
VARSP26640 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.05□□□□□ -0.16
VARSP26640 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VARSP26640 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
VARSP26640 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.05□□□□□ -0.16
VARSP26640 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.05□□□□□ -0.16
VARSP26640 MIR6720-201ENST00000611664 98 ntBASIC14.05□□□□□ -0.16
VARSP26640 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.05□□□□□ -0.16
VARSP26640 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VARSP26640 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VARSP26640 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VARSP26640 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 AC020658.7-201ENST00000624274 2442 ntBASIC14.04□□□□□ -0.16
VARSP26640 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VARSP26640 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14.04□□□□□ -0.16
VARSP26640 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VARSP26640 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.04□□□□□ -0.16
VARSP26640 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.04□□□□□ -0.16
VARSP26640 AC126915.1-201ENST00000522847 1038 ntBASIC14.04□□□□□ -0.16
VARSP26640 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.04□□□□□ -0.16
VARSP26640 KRT8P2-201ENST00000556193 944 ntBASIC14.04□□□□□ -0.16
VARSP26640 AC079328.1-201ENST00000560358 952 ntBASIC14.04□□□□□ -0.16
VARSP26640 AC005586.2-201ENST00000563946 837 ntBASIC14.04□□□□□ -0.16
VARSP26640 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.04□□□□□ -0.16
VARSP26640 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 AC005695.3-201ENST00000614522 232 ntBASIC14.04□□□□□ -0.16
VARSP26640 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.04□□□□□ -0.16
VARSP26640 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 AL008718.2-201ENST00000609206 1313 ntBASIC14.04□□□□□ -0.16
VARSP26640 AC064801.2-201ENST00000625052 1303 ntBASIC14.04□□□□□ -0.16
VARSP26640 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 AC111170.3-201ENST00000624282 2464 ntBASIC14.04□□□□□ -0.16
VARSP26640 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.04□□□□□ -0.16
VARSP26640 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms