Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 AC018735.1-201ENST00000437208 1502 ntBASIC13.3□□□□□ -0.28
CHMP24386 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.3□□□□□ -0.28
CHMP24386 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.3□□□□□ -0.28
CHMP24386 MIR4783-201ENST00000580343 82 ntBASIC13.3□□□□□ -0.28
CHMP24386 AC020914.3-201ENST00000594712 304 ntBASIC13.3□□□□□ -0.28
CHMP24386 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.3□□□□□ -0.28
CHMP24386 BNIP3P13-201ENST00000599968 566 ntBASIC13.3□□□□□ -0.28
CHMP24386 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CHMP24386 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 AC138028.6-201ENST00000616106 1482 ntBASIC13.29□□□□□ -0.28
CHMP24386 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.29□□□□□ -0.28
CHMP24386 LINC02486-201ENST00000604157 3000 ntBASIC13.29□□□□□ -0.28
CHMP24386 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.29□□□□□ -0.28
CHMP24386 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CHMP24386 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CHMP24386 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.29□□□□□ -0.28
CHMP24386 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.29□□□□□ -0.28
CHMP24386 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 AC106794.1-201ENST00000506935 792 ntBASIC13.29□□□□□ -0.28
CHMP24386 SCARNA20.5-201ENST00000516991 142 ntBASIC13.29□□□□□ -0.28
CHMP24386 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.29□□□□□ -0.28
CHMP24386 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.29□□□□□ -0.28
CHMP24386 MIR3615-201ENST00000581999 87 ntBASIC13.29□□□□□ -0.28
CHMP24386 RN7SL163P-201ENST00000583100 276 ntBASIC13.29□□□□□ -0.28
CHMP24386 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CHMP24386 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.29□□□□□ -0.28
CHMP24386 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 MIR6720-201ENST00000611664 98 ntBASIC13.29□□□□□ -0.28
CHMP24386 AP000346.4-201ENST00000614827 381 ntBASIC13.29□□□□□ -0.28
CHMP24386 AC022748.3-201ENST00000621828 275 ntBASIC13.29□□□□□ -0.28
CHMP24386 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.29□□□□□ -0.28
CHMP24386 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.29□□□□□ -0.28
CHMP24386 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 AL031595.1-201ENST00000623969 4709 ntBASIC13.29□□□□□ -0.28
CHMP24386 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHMP24386 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHMP24386 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms