Protein–RNA interactions for Protein: P20827

EFNA1, Ephrin-A1, humanhuman

Predicted RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1P20827 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.54□□□□□ -0.24
EFNA1P20827 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNA1P20827 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.54□□□□□ -0.24
EFNA1P20827 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
EFNA1P20827 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNA1P20827 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNA1P20827 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.54□□□□□ -0.24
EFNA1P20827 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
EFNA1P20827 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.54□□□□□ -0.24
EFNA1P20827 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNA1P20827 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNA1P20827 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNA1P20827 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.53□□□□□ -0.24
EFNA1P20827 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNA1P20827 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 AL354877.1-201ENST00000424412 413 ntBASIC13.53□□□□□ -0.24
EFNA1P20827 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 RNMTL1P1-201ENST00000454103 560 ntBASIC13.53□□□□□ -0.24
EFNA1P20827 AC119751.2-201ENST00000504529 210 ntBASIC13.53□□□□□ -0.24
EFNA1P20827 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.53□□□□□ -0.24
EFNA1P20827 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNA1P20827 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
EFNA1P20827 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNA1P20827 AC106886.1-201ENST00000568660 600 ntBASIC13.53□□□□□ -0.24
EFNA1P20827 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNA1P20827 MIR4259-201ENST00000584466 101 ntBASIC13.53□□□□□ -0.24
EFNA1P20827 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 AC008805.1-201ENST00000590892 364 ntBASIC13.53□□□□□ -0.24
EFNA1P20827 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 AC009884.2-201ENST00000603110 324 ntBASIC13.53□□□□□ -0.24
EFNA1P20827 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA1P20827 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
EFNA1P20827 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA1P20827 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA1P20827 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA1P20827 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA1P20827 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.52□□□□□ -0.24
EFNA1P20827 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.52□□□□□ -0.24
EFNA1P20827 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA1P20827 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA1P20827 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA1P20827 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.52□□□□□ -0.24
EFNA1P20827 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.52□□□□□ -0.24
EFNA1P20827 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA1P20827 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms