Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.98■□□□□ 0.31
NCLP19338 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NCLP19338 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
NCLP19338 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NCLP19338 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.98■□□□□ 0.31
NCLP19338 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NCLP19338 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
NCLP19338 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.98■□□□□ 0.31
NCLP19338 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 KRT43P-201ENST00000434019 910 ntBASIC16.98■□□□□ 0.31
NCLP19338 CROCCP4-201ENST00000457096 498 ntBASIC16.98■□□□□ 0.31
NCLP19338 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.98■□□□□ 0.31
NCLP19338 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NCLP19338 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.98■□□□□ 0.31
NCLP19338 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.98■□□□□ 0.31
NCLP19338 CLUHP6-201ENST00000580789 941 ntBASIC16.98■□□□□ 0.31
NCLP19338 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.98■□□□□ 0.31
NCLP19338 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.98■□□□□ 0.31
NCLP19338 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NCLP19338 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.98■□□□□ 0.31
NCLP19338 AC139712.1-201ENST00000378256 1875 ntBASIC16.98■□□□□ 0.31
NCLP19338 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.98■□□□□ 0.31
NCLP19338 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC16.98■□□□□ 0.31
NCLP19338 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.98■□□□□ 0.31
NCLP19338 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
NCLP19338 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.98■□□□□ 0.31
NCLP19338 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCLP19338 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NCLP19338 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.98■□□□□ 0.31
NCLP19338 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NCLP19338 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC16.97■□□□□ 0.31
NCLP19338 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 AL645937.6-201ENST00000641122 3727 ntBASIC16.97■□□□□ 0.31
NCLP19338 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 BEND3P3-201ENST00000611030 2440 ntBASIC16.97■□□□□ 0.31
NCLP19338 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.97■□□□□ 0.31
NCLP19338 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.97■□□□□ 0.31
NCLP19338 AC119751.2-201ENST00000504529 210 ntBASIC16.97■□□□□ 0.31
NCLP19338 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NCLP19338 PTP4A1P2-201ENST00000546033 454 ntBASIC16.97■□□□□ 0.31
NCLP19338 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NCLP19338 SNX29P1-201ENST00000548357 1007 ntBASIC16.97■□□□□ 0.31
NCLP19338 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.97■□□□□ 0.31
NCLP19338 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.97■□□□□ 0.31
NCLP19338 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.97■□□□□ 0.31
NCLP19338 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NCLP19338 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.97■□□□□ 0.31
NCLP19338 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.97■□□□□ 0.31
NCLP19338 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCLP19338 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.97■□□□□ 0.31
NCLP19338 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.97■□□□□ 0.31
NCLP19338 TUBB8P4-201ENST00000511806 1324 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms