Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SYN1P17600 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SYN1P17600 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC15.12■□□□□ 0.01
SYN1P17600 DUX4L31-201ENST00000446466 1136 ntBASIC15.12■□□□□ 0.01
SYN1P17600 AC069421.1-201ENST00000447462 323 ntBASIC15.12■□□□□ 0.01
SYN1P17600 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SYN1P17600 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC15.12■□□□□ 0.01
SYN1P17600 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC15.12■□□□□ 0.01
SYN1P17600 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC15.12■□□□□ 0.01
SYN1P17600 MIR5193-201ENST00000584510 109 ntBASIC15.12■□□□□ 0.01
SYN1P17600 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC15.12■□□□□ 0.01
SYN1P17600 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SYN1P17600 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.12■□□□□ 0.01
SYN1P17600 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SYN1P17600 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.12■□□□□ 0.01
SYN1P17600 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.12■□□□□ 0.01
SYN1P17600 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.12■□□□□ 0.01
SYN1P17600 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SYN1P17600 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 AC097474.1-201ENST00000506481 1371 ntBASIC15.11■□□□□ 0.01
SYN1P17600 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SYN1P17600 MYADML-201ENST00000474610 2147 ntBASIC15.11■□□□□ 0.01
SYN1P17600 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SYN1P17600 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SYN1P17600 POP5-201ENST00000341039 913 ntTSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.11■□□□□ 0.01
SYN1P17600 AC099343.1-201ENST00000513481 609 ntBASIC15.11■□□□□ 0.01
SYN1P17600 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 PHBP18-201ENST00000546648 813 ntBASIC15.11■□□□□ 0.01
SYN1P17600 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC15.11■□□□□ 0.01
SYN1P17600 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC15.11■□□□□ 0.01
SYN1P17600 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SYN1P17600 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SYN1P17600 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SYN1P17600 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SYN1P17600 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 AC006486.2-201ENST00000624246 2199 ntBASIC15.11■□□□□ 0.01
SYN1P17600 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYN1P17600 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC15.11■□□□□ 0.01
SYN1P17600 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SYN1P17600 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.1■□□□□ 0.01
SYN1P17600 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.1■□□□□ 0.01
SYN1P17600 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.1■□□□□ 0.01
SYN1P17600 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 HSD3BP1-201ENST00000286193 1111 ntBASIC15.1■□□□□ 0.01
SYN1P17600 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SYN1P17600 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYN1P17600 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms