Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 NCLP1-201ENST00000445357 1963 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 AGAP12P-201ENST00000585227 2359 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 RN7SKP214-201ENST00000364208 315 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 RNA5SP359-201ENST00000364838 113 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 RPS9P1-201ENST00000419943 583 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 AK2P2-201ENST00000439142 405 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 EIF4HP1-201ENST00000453115 687 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 AC093752.3-201ENST00000567343 901 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 AC026740.1-201ENST00000607068 791 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 AL022334.2-201ENST00000610000 484 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 RCC2P1-201ENST00000452257 1476 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 CICP17-201ENST00000418553 2377 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 AC068760.1-201ENST00000493579 1953 ntBASIC12.69□□□□□ -0.38
HLA-DOBP13765 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 AC061965.1-201ENST00000560524 1465 ntBASIC12.68□□□□□ -0.38
HLA-DOBP13765 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.68□□□□□ -0.38
HLA-DOBP13765 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 AC016700.1-201ENST00000429424 312 ntBASIC12.68□□□□□ -0.38
HLA-DOBP13765 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 AC092658.1-201ENST00000505836 891 ntBASIC12.68□□□□□ -0.38
HLA-DOBP13765 ZNF767P-206ENST00000513792 565 ntBASIC12.68□□□□□ -0.38
HLA-DOBP13765 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 AC243960.2-201ENST00000600996 747 ntBASIC12.68□□□□□ -0.38
HLA-DOBP13765 AL645939.5-201ENST00000606834 243 ntBASIC12.68□□□□□ -0.38
HLA-DOBP13765 MIR6869-201ENST00000619434 62 ntBASIC12.68□□□□□ -0.38
HLA-DOBP13765 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms