Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 RPL13AP3-202ENST00000494676 1473 ntBASIC13.54□□□□□ -0.24
BCKDHAP12694 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BCKDHAP12694 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.54□□□□□ -0.24
BCKDHAP12694 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
BCKDHAP12694 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
BCKDHAP12694 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
BCKDHAP12694 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BCKDHAP12694 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.53□□□□□ -0.24
BCKDHAP12694 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 AC108024.1-201ENST00000626286 1721 ntBASIC13.53□□□□□ -0.24
BCKDHAP12694 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.53□□□□□ -0.24
BCKDHAP12694 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.53□□□□□ -0.24
BCKDHAP12694 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
BCKDHAP12694 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 GAPDHP21-201ENST00000450301 1010 ntBASIC13.53□□□□□ -0.24
BCKDHAP12694 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 GOLGA2P8-201ENST00000505201 779 ntBASIC13.53□□□□□ -0.24
BCKDHAP12694 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.53□□□□□ -0.24
BCKDHAP12694 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.53□□□□□ -0.24
BCKDHAP12694 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
BCKDHAP12694 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 CR383656.2-201ENST00000548656 2254 ntBASIC13.53□□□□□ -0.24
BCKDHAP12694 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 PCDHA6-201ENST00000378126 3267 ntBASIC13.53□□□□□ -0.24
BCKDHAP12694 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
BCKDHAP12694 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.53□□□□□ -0.24
BCKDHAP12694 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.53□□□□□ -0.24
BCKDHAP12694 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.53□□□□□ -0.24
BCKDHAP12694 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.53□□□□□ -0.24
BCKDHAP12694 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BCKDHAP12694 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
BCKDHAP12694 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BCKDHAP12694 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
BCKDHAP12694 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
BCKDHAP12694 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.52□□□□□ -0.24
BCKDHAP12694 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.52□□□□□ -0.24
BCKDHAP12694 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.52□□□□□ -0.24
BCKDHAP12694 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.52□□□□□ -0.24
BCKDHAP12694 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.52□□□□□ -0.24
BCKDHAP12694 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.52□□□□□ -0.24
BCKDHAP12694 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.52□□□□□ -0.24
BCKDHAP12694 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
BCKDHAP12694 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.52□□□□□ -0.24
BCKDHAP12694 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BCKDHAP12694 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
BCKDHAP12694 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.52□□□□□ -0.24
BCKDHAP12694 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
BCKDHAP12694 PEG13-201ENST00000631594 5667 ntBASIC13.52□□□□□ -0.25
BCKDHAP12694 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BCKDHAP12694 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BCKDHAP12694 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BCKDHAP12694 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.52□□□□□ -0.25
BCKDHAP12694 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
BCKDHAP12694 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.52□□□□□ -0.25
BCKDHAP12694 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.52□□□□□ -0.25
BCKDHAP12694 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BCKDHAP12694 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BCKDHAP12694 SNORA50C-201ENST00000408535 133 ntBASIC13.52□□□□□ -0.25
BCKDHAP12694 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.52□□□□□ -0.25
BCKDHAP12694 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
BCKDHAP12694 U91328.1-201ENST00000437528 223 ntBASIC13.52□□□□□ -0.25
BCKDHAP12694 RNMTL1P1-201ENST00000454103 560 ntBASIC13.52□□□□□ -0.25
BCKDHAP12694 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.52□□□□□ -0.25
BCKDHAP12694 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.52□□□□□ -0.25
BCKDHAP12694 AC021723.1-201ENST00000486306 515 ntBASIC13.52□□□□□ -0.25
BCKDHAP12694 HLA-J-204ENST00000495278 958 ntBASIC13.52□□□□□ -0.25
BCKDHAP12694 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.52□□□□□ -0.25
BCKDHAP12694 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.52□□□□□ -0.25
BCKDHAP12694 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.52□□□□□ -0.25
BCKDHAP12694 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.52□□□□□ -0.25
BCKDHAP12694 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.52□□□□□ -0.25
BCKDHAP12694 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms