Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.1□□□□□ -0.31
BMP4P12644 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.1□□□□□ -0.31
BMP4P12644 RN7SL48P-201ENST00000579283 293 ntBASIC13.1□□□□□ -0.31
BMP4P12644 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 AC145423.3-201ENST00000615987 467 ntBASIC13.1□□□□□ -0.31
BMP4P12644 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.1□□□□□ -0.31
BMP4P12644 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 AC138951.2-201ENST00000623455 1161 ntBASIC13.1□□□□□ -0.31
BMP4P12644 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 AP003969.2-201ENST00000623739 2275 ntBASIC13.1□□□□□ -0.31
BMP4P12644 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
BMP4P12644 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 AC060814.4-201ENST00000594169 2163 ntBASIC13.1□□□□□ -0.31
BMP4P12644 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BMP4P12644 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BMP4P12644 AC027369.3-201ENST00000530465 3707 ntBASIC13.1□□□□□ -0.31
BMP4P12644 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 REXO1L6P-201ENST00000603433 1515 ntBASIC13.09□□□□□ -0.31
BMP4P12644 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.09□□□□□ -0.31
BMP4P12644 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.09□□□□□ -0.31
BMP4P12644 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
BMP4P12644 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
BMP4P12644 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
BMP4P12644 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.09□□□□□ -0.31
BMP4P12644 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 KLF2P2-201ENST00000416807 1039 ntBASIC13.09□□□□□ -0.31
BMP4P12644 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 AC006518.1-201ENST00000541449 943 ntBASIC13.09□□□□□ -0.31
BMP4P12644 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.09□□□□□ -0.31
BMP4P12644 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.09□□□□□ -0.31
BMP4P12644 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.09□□□□□ -0.31
BMP4P12644 DUX4L45-201ENST00000566406 1057 ntBASIC13.09□□□□□ -0.31
BMP4P12644 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.09□□□□□ -0.31
BMP4P12644 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.09□□□□□ -0.31
BMP4P12644 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC13.09□□□□□ -0.31
BMP4P12644 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.09□□□□□ -0.31
BMP4P12644 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 AL360270.3-201ENST00000609118 1348 ntBASIC13.09□□□□□ -0.31
BMP4P12644 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.09□□□□□ -0.31
BMP4P12644 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
BMP4P12644 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BMP4P12644 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.09□□□□□ -0.31
BMP4P12644 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
BMP4P12644 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
BMP4P12644 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.08□□□□□ -0.31
BMP4P12644 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.08□□□□□ -0.31
BMP4P12644 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
BMP4P12644 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms