Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AL354877.1-201ENST00000424412 413 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 FAM21FP-201ENST00000426241 1131 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 HLA-V-201ENST00000429037 534 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AC021723.1-201ENST00000486306 515 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AL512310.5-201ENST00000551999 515 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 KRT18P8-201ENST00000581937 1246 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AC005962.1-201ENST00000584100 773 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AC133552.6-201ENST00000613406 534 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 AGAP10P-201ENST00000454844 2418 ntBASIC12.98□□□□□ -0.33
HIST1H2ABP04908 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HIST1H2ABP04908 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 MIR1909-201ENST00000411312 80 ntBASIC12.97□□□□□ -0.33
HIST1H2ABP04908 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 AP005482.1-201ENST00000563722 1273 ntBASIC12.97□□□□□ -0.33
HIST1H2ABP04908 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 AC010328.2-201ENST00000597698 1111 ntBASIC12.97□□□□□ -0.33
HIST1H2ABP04908 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 AC133540.1-201ENST00000620845 1019 ntBASIC12.97□□□□□ -0.33
HIST1H2ABP04908 AC090386.2-201ENST00000623010 1039 ntBASIC12.97□□□□□ -0.33
HIST1H2ABP04908 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 AC004899.2-201ENST00000622993 3860 ntBASIC12.97□□□□□ -0.33
HIST1H2ABP04908 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2ABP04908 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms