Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC10.68□□□□□ -0.7
LTAP01374 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC10.68□□□□□ -0.7
LTAP01374 CU634019.7-201ENST00000624153 1185 ntBASIC10.68□□□□□ -0.7
LTAP01374 FP236241.2-201ENST00000624906 1185 ntBASIC10.68□□□□□ -0.7
LTAP01374 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC10.68□□□□□ -0.7
LTAP01374 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LTAP01374 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC10.68□□□□□ -0.7
LTAP01374 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LTAP01374 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
LTAP01374 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC10.68□□□□□ -0.7
LTAP01374 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC10.68□□□□□ -0.7
LTAP01374 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
LTAP01374 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LTAP01374 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC10.67□□□□□ -0.7
LTAP01374 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 DFFBP1-201ENST00000433250 979 ntBASIC10.67□□□□□ -0.7
LTAP01374 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 TMPRSS11CP-201ENST00000453277 683 ntBASIC10.67□□□□□ -0.7
LTAP01374 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 AC027369.3-201ENST00000530465 3707 ntBASIC10.67□□□□□ -0.7
LTAP01374 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 TMBIM7P-202ENST00000641474 1516 ntBASIC10.67□□□□□ -0.7
LTAP01374 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LTAP01374 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LTAP01374 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LTAP01374 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC10.66□□□□□ -0.7
LTAP01374 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LTAP01374 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LTAP01374 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LTAP01374 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 ANKRD30BP2-201ENST00000435744 1610 ntBASIC10.66□□□□□ -0.7
LTAP01374 AC015819.3-201ENST00000624305 2674 ntBASIC10.66□□□□□ -0.7
LTAP01374 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LTAP01374 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LTAP01374 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LTAP01374 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.66□□□□□ -0.7
LTAP01374 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms