Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 SPTLC1P1-201ENST00000447199 261 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AL132655.2-201ENST00000596276 594 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 OR10B1P-201ENST00000601666 907 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 CHCHD2P3-201ENST00000603038 451 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AC104758.3-203ENST00000562938 2123 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 VENTXP1-201ENST00000569334 2716 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 CES1P1-201ENST00000421606 1704 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 AL805961.2-201ENST00000642139 4817 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 AC134312.5-201ENST00000568031 1313 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 SALL4P6-201ENST00000429385 1691 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 LINC01165-201ENST00000445190 1623 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 AC087499.6-201ENST00000411576 835 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 AC012441.1-201ENST00000446669 685 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 AP003171.2-201ENST00000528208 925 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 ECM1P1-201ENST00000604092 1279 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 AC009118.2-201ENST00000613275 655 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 GHET1-201ENST00000627071 1906 ntBASIC12.13□□□□□ -0.47
TMEM235A6NFC5 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TMEM235A6NFC5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.12□□□□□ -0.47
TMEM235A6NFC5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TMEM235A6NFC5 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TMEM235A6NFC5 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TMEM235A6NFC5 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TMEM235A6NFC5 LINC00638-201ENST00000555578 2518 ntBASIC12.12□□□□□ -0.47
TMEM235A6NFC5 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TMEM235A6NFC5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TMEM235A6NFC5 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms