Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPS28Q9Y2Q9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 CLDN5-201ENST00000403084 2357 ntBASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 DUX4L18-201ENST00000553347 1267 ntBASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.31■□□□□ 0.68
MRPS28Q9Y2Q9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 LINC00526-201ENST00000581067 1875 ntBASIC19.3■□□□□ 0.68
MRPS28Q9Y2Q9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 LINC00565-201ENST00000562710 2331 ntBASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.29■□□□□ 0.68
MRPS28Q9Y2Q9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 AC079630.1-202ENST00000618127 1840 ntBASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 AC120024.1-201ENST00000562672 995 ntBASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 ECEL1P1-201ENST00000373592 1742 ntBASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
MRPS28Q9Y2Q9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MRPS28Q9Y2Q9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MRPS28Q9Y2Q9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MRPS28Q9Y2Q9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MRPS28Q9Y2Q9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MRPS28Q9Y2Q9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MRPS28Q9Y2Q9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 BHLHE23-202ENST00000612929 1109 ntBASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPS28Q9Y2Q9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MRPS28Q9Y2Q9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms