Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RCL1Q9Y2P8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 RPS2P35-201ENST00000443417 897 ntBASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 MIR3648-2-201ENST00000581792 180 ntBASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 MIR3648-1-201ENST00000615959 180 ntBASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RCL1Q9Y2P8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RCL1Q9Y2P8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RCL1Q9Y2P8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.33■□□□□ 0.53
RCL1Q9Y2P8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RCL1Q9Y2P8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
RCL1Q9Y2P8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RCL1Q9Y2P8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RCL1Q9Y2P8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RCL1Q9Y2P8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RCL1Q9Y2P8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.33■□□□□ 0.52
RCL1Q9Y2P8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 AC090877.2-201ENST00000558441 1738 ntBASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCL1Q9Y2P8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 ECEL1P2-201ENST00000461596 1295 ntBASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCL1Q9Y2P8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RCL1Q9Y2P8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 RAP2CP1-202ENST00000605179 643 ntBASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RCL1Q9Y2P8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms