Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP50Q9UKX7 BX664725.1-201ENST00000438252 379 ntBASIC19.47■□□□□ 0.71
NUP50Q9UKX7 AL356441.2-201ENST00000443009 864 ntBASIC19.47■□□□□ 0.71
NUP50Q9UKX7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NUP50Q9UKX7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP50Q9UKX7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP50Q9UKX7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP50Q9UKX7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP50Q9UKX7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP50Q9UKX7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 AL592295.1-201ENST00000400984 884 ntBASIC19.46■□□□□ 0.71
NUP50Q9UKX7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NUP50Q9UKX7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP50Q9UKX7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP50Q9UKX7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 DUSP8P3-201ENST00000399571 1760 ntBASIC19.43■□□□□ 0.7
NUP50Q9UKX7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP50Q9UKX7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 MIR4787-201ENST00000607364 84 ntBASIC19.42■□□□□ 0.7
NUP50Q9UKX7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP50Q9UKX7 AC096887.2-201ENST00000623443 1957 ntBASIC19.41■□□□□ 0.7
NUP50Q9UKX7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP50Q9UKX7 AC233723.2-201ENST00000623798 2106 ntBASIC19.4■□□□□ 0.7
NUP50Q9UKX7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms