Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX41Q9UJV9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
DDX41Q9UJV9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.78■■□□□ 1.72
DDX41Q9UJV9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.78■■□□□ 1.72
DDX41Q9UJV9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX41Q9UJV9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
DDX41Q9UJV9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX41Q9UJV9 DUX4L19-201ENST00000557448 1267 ntBASIC25.78■■□□□ 1.72
DDX41Q9UJV9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
DDX41Q9UJV9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX41Q9UJV9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX41Q9UJV9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.77■■□□□ 1.72
DDX41Q9UJV9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.77■■□□□ 1.72
DDX41Q9UJV9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX41Q9UJV9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
DDX41Q9UJV9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
DDX41Q9UJV9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.77■■□□□ 1.72
DDX41Q9UJV9 EDA-201ENST00000338901 1233 ntBASIC25.76■■□□□ 1.71
DDX41Q9UJV9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 AC138932.3-201ENST00000567634 1902 ntBASIC25.76■■□□□ 1.71
DDX41Q9UJV9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.76■■□□□ 1.71
DDX41Q9UJV9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX41Q9UJV9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 AL161729.1-201ENST00000604104 1402 ntBASIC25.74■■□□□ 1.71
DDX41Q9UJV9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 ZNRF2P3-201ENST00000424200 374 ntBASIC25.74■■□□□ 1.71
DDX41Q9UJV9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 AL355001.2-201ENST00000620617 1191 ntBASIC25.74■■□□□ 1.71
DDX41Q9UJV9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX41Q9UJV9 SYT6-210ENST00000641643 1587 ntBASIC25.73■■□□□ 1.71
DDX41Q9UJV9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
DDX41Q9UJV9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.73■■□□□ 1.71
DDX41Q9UJV9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.73■■□□□ 1.71
DDX41Q9UJV9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX41Q9UJV9 AC099791.2-201ENST00000605725 427 ntBASIC25.73■■□□□ 1.71
DDX41Q9UJV9 AC092171.4-201ENST00000609130 632 ntBASIC25.73■■□□□ 1.71
DDX41Q9UJV9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX41Q9UJV9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.73■■□□□ 1.71
DDX41Q9UJV9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX41Q9UJV9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
DDX41Q9UJV9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX41Q9UJV9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX41Q9UJV9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.72■■□□□ 1.71
DDX41Q9UJV9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.72■■□□□ 1.71
DDX41Q9UJV9 AC022211.4-201ENST00000625094 2161 ntBASIC25.72■■□□□ 1.71
DDX41Q9UJV9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
DDX41Q9UJV9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX41Q9UJV9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
DDX41Q9UJV9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX41Q9UJV9 C17orf82-201ENST00000623772 1530 ntBASIC25.71■■□□□ 1.71
DDX41Q9UJV9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
DDX41Q9UJV9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
DDX41Q9UJV9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
DDX41Q9UJV9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
DDX41Q9UJV9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX41Q9UJV9 SERBP1P1-201ENST00000396021 1160 ntBASIC25.7■■□□□ 1.7
DDX41Q9UJV9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX41Q9UJV9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.7■■□□□ 1.7
DDX41Q9UJV9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.7■■□□□ 1.7
DDX41Q9UJV9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.7■■□□□ 1.7
DDX41Q9UJV9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
DDX41Q9UJV9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 AL136967.2-201ENST00000623968 743 ntBASIC25.69■■□□□ 1.7
DDX41Q9UJV9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
DDX41Q9UJV9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX41Q9UJV9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
DDX41Q9UJV9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
DDX41Q9UJV9 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms