Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 AC004448.1-201ENST00000458332 883 ntBASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNIP1Q9NZI2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 DUSP8P3-201ENST00000399571 1760 ntBASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.81■□□□□ 0.6
KCNIP1Q9NZI2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 C9orf163-202ENST00000624034 2573 ntBASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KCNIP1Q9NZI2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNIP1Q9NZI2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNIP1Q9NZI2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.79■□□□□ 0.6
KCNIP1Q9NZI2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNIP1Q9NZI2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
KCNIP1Q9NZI2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNIP1Q9NZI2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNIP1Q9NZI2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.79■□□□□ 0.6
KCNIP1Q9NZI2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 KRT8P33-201ENST00000508125 1423 ntBASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNIP1Q9NZI2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
KCNIP1Q9NZI2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
KCNIP1Q9NZI2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
KCNIP1Q9NZI2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNIP1Q9NZI2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNIP1Q9NZI2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNIP1Q9NZI2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNIP1Q9NZI2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms