Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPHK1Q9NYA1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
SPHK1Q9NYA1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 AC006455.2-201ENST00000429931 906 ntBASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 AC110285.6-201ENST00000617652 491 ntBASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPHK1Q9NYA1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SPHK1Q9NYA1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 UNC93B3-201ENST00000308076 687 ntBASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPHK1Q9NYA1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.67■■□□□ 1.06
SPHK1Q9NYA1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK1Q9NYA1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK1Q9NYA1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK1Q9NYA1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK1Q9NYA1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.67■■□□□ 1.06
SPHK1Q9NYA1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPHK1Q9NYA1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 AL139246.5-201ENST00000606645 996 ntBASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 AC241377.3-202ENST00000626088 1088 ntBASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 AC241585.3-202ENST00000628937 1088 ntBASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 AC245100.8-202ENST00000629247 1058 ntBASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 AC079630.1-202ENST00000618127 1840 ntBASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPHK1Q9NYA1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SPHK1Q9NYA1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SPHK1Q9NYA1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.65■■□□□ 1.06
SPHK1Q9NYA1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK1Q9NYA1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
SPHK1Q9NYA1 AC009086.3-201ENST00000623486 1008 ntBASIC21.65■■□□□ 1.06
SPHK1Q9NYA1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPHK1Q9NYA1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHK1Q9NYA1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHK1Q9NYA1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHK1Q9NYA1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHK1Q9NYA1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPHK1Q9NYA1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 AC144652.1-201ENST00000609974 1624 ntBASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPHK1Q9NYA1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 SYT6-210ENST00000641643 1587 ntBASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 SERBP1P1-201ENST00000396021 1160 ntBASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 AL136162.1-201ENST00000607711 1078 ntBASIC21.63■■□□□ 1.05
SPHK1Q9NYA1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms