Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 PBX2P1-201ENST00000493219 1291 ntBASIC20.78■□□□□ 0.92
HPF1Q9NWY4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 AC099791.2-201ENST00000605725 427 ntBASIC20.78■□□□□ 0.92
HPF1Q9NWY4 AL136162.1-201ENST00000607711 1078 ntBASIC20.78■□□□□ 0.92
HPF1Q9NWY4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.77■□□□□ 0.92
HPF1Q9NWY4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPF1Q9NWY4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPF1Q9NWY4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPF1Q9NWY4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HPF1Q9NWY4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.77■□□□□ 0.92
HPF1Q9NWY4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPF1Q9NWY4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPF1Q9NWY4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HPF1Q9NWY4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HPF1Q9NWY4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HPF1Q9NWY4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPF1Q9NWY4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.76■□□□□ 0.91
HPF1Q9NWY4 AC106739.1-201ENST00000617035 715 ntBASIC20.76■□□□□ 0.91
HPF1Q9NWY4 AC241377.3-202ENST00000626088 1088 ntBASIC20.76■□□□□ 0.91
HPF1Q9NWY4 AC241585.3-202ENST00000628937 1088 ntBASIC20.76■□□□□ 0.91
HPF1Q9NWY4 AC245100.8-202ENST00000629247 1058 ntBASIC20.76■□□□□ 0.91
HPF1Q9NWY4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HPF1Q9NWY4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
HPF1Q9NWY4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPF1Q9NWY4 AC135279.3-201ENST00000610945 1311 ntBASIC20.76■□□□□ 0.91
HPF1Q9NWY4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.75■□□□□ 0.91
HPF1Q9NWY4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 AC133561.4-201ENST00000566112 224 ntBASIC20.74■□□□□ 0.91
HPF1Q9NWY4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPF1Q9NWY4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.73■□□□□ 0.91
HPF1Q9NWY4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 AC024257.2-201ENST00000549699 147 ntBASIC20.72■□□□□ 0.91
HPF1Q9NWY4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 AC005837.3-201ENST00000612163 286 ntBASIC20.72■□□□□ 0.91
HPF1Q9NWY4 AC009086.3-201ENST00000623486 1008 ntBASIC20.72■□□□□ 0.91
HPF1Q9NWY4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HPF1Q9NWY4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPF1Q9NWY4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HPF1Q9NWY4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.7■□□□□ 0.9
HPF1Q9NWY4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPF1Q9NWY4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms