Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RYDENQ9NUL5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RYDENQ9NUL5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RYDENQ9NUL5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RYDENQ9NUL5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RYDENQ9NUL5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RYDENQ9NUL5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RYDENQ9NUL5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.58■□□□□ 0.89
RYDENQ9NUL5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RYDENQ9NUL5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RYDENQ9NUL5 AL355001.2-201ENST00000620617 1191 ntBASIC20.58■□□□□ 0.89
RYDENQ9NUL5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.58■□□□□ 0.88
RYDENQ9NUL5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RYDENQ9NUL5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 AC004812.2-201ENST00000611079 2094 ntBASIC20.57■□□□□ 0.88
RYDENQ9NUL5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 SERBP1P1-201ENST00000396021 1160 ntBASIC20.57■□□□□ 0.88
RYDENQ9NUL5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.57■□□□□ 0.88
RYDENQ9NUL5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.57■□□□□ 0.88
RYDENQ9NUL5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RYDENQ9NUL5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RYDENQ9NUL5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RYDENQ9NUL5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.56■□□□□ 0.88
RYDENQ9NUL5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RYDENQ9NUL5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.56■□□□□ 0.88
RYDENQ9NUL5 PBX2P1-201ENST00000493219 1291 ntBASIC20.56■□□□□ 0.88
RYDENQ9NUL5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RYDENQ9NUL5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RYDENQ9NUL5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.55■□□□□ 0.88
RYDENQ9NUL5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 MIR638-201ENST00000385237 100 ntBASIC20.55■□□□□ 0.88
RYDENQ9NUL5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 MIR3181-201ENST00000578512 73 ntBASIC20.55■□□□□ 0.88
RYDENQ9NUL5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RYDENQ9NUL5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RYDENQ9NUL5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 AC024257.2-201ENST00000549699 147 ntBASIC20.53■□□□□ 0.88
RYDENQ9NUL5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
RYDENQ9NUL5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.52■□□□□ 0.88
RYDENQ9NUL5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 BX842568.3-201ENST00000418104 571 ntBASIC20.51■□□□□ 0.87
RYDENQ9NUL5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 pRNA.6-201ENST00000610482 90 ntBASIC20.51■□□□□ 0.87
RYDENQ9NUL5 pRNA.5-201ENST00000612139 90 ntBASIC20.51■□□□□ 0.87
RYDENQ9NUL5 AC005837.3-201ENST00000612163 286 ntBASIC20.51■□□□□ 0.87
RYDENQ9NUL5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.51■□□□□ 0.87
RYDENQ9NUL5 pRNA.11-201ENST00000618423 90 ntBASIC20.51■□□□□ 0.87
RYDENQ9NUL5 pRNA.13-201ENST00000619112 90 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms