Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 AL133380.1-201ENST00000506013 324 ntBASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMCO4Q9NRQ5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMCO4Q9NRQ5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
SMCO4Q9NRQ5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SMCO4Q9NRQ5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SMCO4Q9NRQ5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 AC092053.2-201ENST00000640557 1818 ntBASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 MIR6089-201ENST00000616698 64 ntBASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 LINC01521-201ENST00000504184 1943 ntBASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.7■□□□□ 0.42
SMCO4Q9NRQ5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMCO4Q9NRQ5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
SMCO4Q9NRQ5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMCO4Q9NRQ5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.68■□□□□ 0.42
SMCO4Q9NRQ5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMCO4Q9NRQ5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.68■□□□□ 0.42
SMCO4Q9NRQ5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMCO4Q9NRQ5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.68■□□□□ 0.42
SMCO4Q9NRQ5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMCO4Q9NRQ5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMCO4Q9NRQ5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms