Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEUROD4Q9HD90 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
NEUROD4Q9HD90 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NEUROD4Q9HD90 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEUROD4Q9HD90 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.18■□□□□ 0.98
NEUROD4Q9HD90 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 BX664725.1-201ENST00000438252 379 ntBASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 AC079630.1-202ENST00000618127 1840 ntBASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NEUROD4Q9HD90 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 AC021242.3-201ENST00000607598 1377 ntBASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEUROD4Q9HD90 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEUROD4Q9HD90 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEUROD4Q9HD90 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.15■□□□□ 0.98
NEUROD4Q9HD90 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NEUROD4Q9HD90 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEUROD4Q9HD90 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEUROD4Q9HD90 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.15■□□□□ 0.98
NEUROD4Q9HD90 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NEUROD4Q9HD90 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 MIR6722-201ENST00000617286 78 ntBASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEUROD4Q9HD90 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEUROD4Q9HD90 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NEUROD4Q9HD90 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NEUROD4Q9HD90 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.11■□□□□ 0.97
NEUROD4Q9HD90 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NEUROD4Q9HD90 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NEUROD4Q9HD90 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NEUROD4Q9HD90 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
NEUROD4Q9HD90 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.11■□□□□ 0.97
NEUROD4Q9HD90 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NEUROD4Q9HD90 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 AC005703.6-201ENST00000623265 1329 ntBASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms